14
 min read

Integrating AI with Legacy Systems: Key Challenges for CTOs to Solve

Explore key challenges CTOs face when integrating AI with legacy systems, from data silos to security and ROI concerns.
Integrating AI with Legacy Systems: Key Challenges for CTOs to Solve
Published on
November 13, 2025
Category
AI Training

The Modernization Crossroads

Artificial Intelligence (AI) is rapidly becoming a cornerstone of enterprise innovation, but many organizations still run on decades-old legacy systems that weren’t built with AI in mind. These legacy platforms remain the backbone of critical operations in every industry, for example, core banking systems and insurance platforms that process trillions of dollars are often built on technology from the 20th century. As much as 70% of software used by Fortune 500 companies was developed over 20 years ago. Replacing these entrenched systems outright is usually impractical due to high costs, multi-year timelines, and risks of disrupting business continuity. Thus, integrating modern AI capabilities into legacy environments has become an imperative for enterprises seeking to stay competitive without “ripping and replacing” everything at once. However, this integration presents a host of challenges. Legacy maintenance already consumes the majority of IT budgets (up to 80% in many cases), leaving limited resources for innovation. CTOs find themselves at a crossroads: they must bridge cutting-edge AI with aging infrastructure, delivering new value while keeping the lights on. Below, we outline the key challenges in integrating AI with legacy systems, challenges that CTOs, along with HR leaders, CISOs, and business executives, will need to navigate to ensure a successful digital transformation.

Data Silos and Quality Issues

AI’s effectiveness hinges on data, the more accessible, unified, and high-quality the data, the better AI models can learn and deliver insights. Legacy systems, unfortunately, are notorious for holding data in isolated silos and outdated formats. Over years or decades, different departments and applications accumulate their own separate databases, making it difficult to achieve a single source of truth. When an organization attempts to layer AI on top of these silos, the AI models struggle. Fragmented data across departments remains a critical roadblock. Without centralized access to high-quality data, AI models underperform. Poor data quality (e.g. missing or inconsistent fields) further skews AI predictions. For instance, if a legacy CRM and a billing system have duplicate or conflicting customer records, an AI tool for customer analytics may produce faulty results. CTOs need to address these data challenges by investing in data integration and cleansing before AI can be meaningfully deployed. Investing in structured AI training programs ensures that technical teams understand how to manage, prepare, and govern data effectively for AI readiness. This might involve building data lakes or warehouses that aggregate legacy data, using Extract-Transform-Load (ETL) pipelines to convert data into AI-friendly formats, and enforcing data governance standards to improve quality. Ultimately, without breaking down data silos, any AI initiative is likely to be starved of reliable fuel, resulting in insights that are at best limited and at worst misleading.

Technical Compatibility and Performance Constraints

Legacy environments pose significant technical hurdles for AI integration. Many legacy applications were written in older languages (COBOL, outdated Java, etc.) and run on on-premises mainframes or antiquated hardware. These systems “were not built to handle AI models, modern algorithms, or even cloud-based processing”, making direct integration a technical headache. Common issues include a lack of APIs or interfaces to connect AI modules, data formats that don’t align with modern AI frameworks, and proprietary architectures that resist interoperability. Even basic tasks like feeding data from a legacy system into a machine learning model can require complex middleware or custom adapters. Moreover, advanced AI workloads (like training a deep learning model) demand substantial computing power, memory, and sometimes real-time processing, demands that older systems often cannot keep up with. As one report notes, many enterprises are still running on outdated platforms that cannot support real-time AI analytics and lack interoperability. These performance bottlenecks mean that trying to run AI on the legacy system itself could slow operations to a crawl or even cause failures. To solve this, CTOs may employ strategies such as offloading AI tasks to cloud infrastructure or edge servers while keeping core legacy functions intact. Techniques like containerization and using APIs can allow legacy and AI components to interact without overburdening the old system. Nonetheless, ensuring compatibility between new AI tools and old tech stack requires careful architecture planning. The challenge for technology leaders is to create a bridge between eras of technology, one that allows AI to enhance operations without breaking the stability of legacy systems.

Security and Compliance Hurdles

Integrating AI with legacy systems can open new doors, and not only for innovation, but also for cyber threats and compliance risks. Legacy systems are often more vulnerable to security breaches because they lack modern security controls and may no longer receive vendor updates or patches. A large share of data breaches occur in organizations still running legacy technology; one analysis attributed 70% of breaches to companies operating legacy systems. When new AI modules or connections are added on top of an old system, they might expose previously dormant vulnerabilities. For example, connecting a legacy database to a new AI-powered cloud service could inadvertently create a pathway for attackers if not properly secured. Cybersecurity is a paramount concern for CISOs during AI integration, any weakness in legacy defenses can be exploited. Thus, additional safeguards (encryption, robust identity and access management, API security gateways, etc.) must be implemented as part of the integration.

Compliance is another critical aspect. Many industries, from finance to healthcare, have strict regulations governing data usage, privacy, and algorithmic accountability. Legacy systems might contain sensitive personal data subject to laws like GDPR, HIPAA, or sector-specific rules. Introducing AI could mean that data is being processed in new ways or in new locations (e.g. cloud platforms), raising questions about regulatory compliance. Governments are also enacting AI-specific regulations. For instance, the EU’s AI Act (effective 2024) places requirements on how organisations handle AI, especially regarding transparency, bias, and privacy. A CTO must ensure that integrating AI into a legacy process doesn’t lead to violations, whether it’s an AI making an automated decision that lacks explainability, or simply transferring data across borders without proper controls. To address these challenges, enterprises should incorporate security and compliance checkpoints into every step of their AI integration roadmap. This includes conducting thorough risk assessments, updating legacy security measures (if possible) or isolating legacy components behind secure APIs, and working closely with compliance officers. Strengthening governance is key: define who can access what data, how AI models are validated for fairness and accuracy, and how to audit AI outputs that influence business decisions. By treating security and compliance not as afterthoughts but as integral parts of the integration, CTOs and CISOs can protect the organization as it upgrades. After all, a successful AI initiative is not just measured by new insights or efficiency gains, but also by maintaining the trust of customers and regulators.

Talent Gaps and Cultural Resistance

Technology challenges often steal the spotlight, but the human factor is just as crucial when blending AI with legacy systems. Organizations need people with the right skills to implement and maintain AI solutions, yet the demand for AI talent far outstrips supply. As of mid-2025, AI expertise has become the most scarce skill in IT, with more than half of IT leaders saying their companies suffer from an AI talent shortage. This skills gap spans data scientists who can build algorithms, engineers who understand both AI and the old systems, and even project managers who can bridge business needs with technical execution. HR professionals have the challenge of upskilling existing staff and attracting new talent in a competitive market. Some companies are creating cross-functional “fusion teams”, pairing legacy system veterans with younger AI specialists, to transfer knowledge in both directions. Others invest in training programs to turn their domain experts into “citizen data scientists.” Regardless of approach, closing the talent gap is a top priority: without skilled people, even the best AI tools will languish unused.

Equally important is managing the cultural change that AI introduces. Employees who have spent careers working on or with legacy systems might view AI with skepticism or fear. It’s common for staff to worry that AI-driven automation will make their jobs redundant or drastically change their day-to-day routines. Indeed, some employees will readily embrace new AI tools, but others will be skeptical and even worry they’re being replaced, causing internal pushback. This resistance can manifest as reluctance to use AI features, or even active obstruction of AI initiatives. Front-line workers might trust their traditional methods over AI recommendations, undermining the potential benefits. To overcome this, CTOs and business leaders must lead with empathy and transparency. Communicating a clear vision, that AI is there to augment human work, not replace it, is essential. Involving employees early by explaining how an AI enhancement will make their work easier or more interesting can turn doubters into advocates. Offering training and reskilling opportunities also helps ease fears, as people gain confidence in working alongside AI. Some organizations designate internal “AI champions” or change agents to evangelize the benefits of new AI integrations and help colleagues learn the ropes. From the CISO and compliance perspective, fostering a culture of security and ethics in AI use is important too (for example, educating staff on why certain data cannot be fed into an AI tool). Ultimately, successfully integrating AI into legacy environments is as much about people and mindset as it is about technology. Enterprises that cultivate an AI-ready culture, one that values continuous learning and adaptation, will navigate the transition far more smoothly than those that don’t.

Cost and ROI Uncertainties

Every new technology investment comes down to a balance of cost versus benefit, and with AI integration this equation can be especially tricky. Modernizing legacy systems or augmenting them with AI can require significant upfront spending, from acquiring AI software or cloud services, to consulting and development costs, to potential downtime during integration. Business owners and CFOs will rightly ask: is this going to be worth it? One historical reason many companies deferred legacy modernization is that the return on investment was unclear. The same concern applies to AI projects. While AI has enormous promise, measuring its tangible ROI can be challenging, especially in the early stages. In fact, surveys show that despite broad interest in AI, over two-thirds of business leaders have not yet seen a measurable ROI from their AI initiatives. There may be a time lag between implementing an AI solution and reaping business value (e.g., an AI-driven optimization might need months of data to generate significant savings). This lag can test the patience of executives and stakeholders expecting quick wins. Moreover, some benefits of AI, like improved decision quality or better customer experience, are inherently harder to quantify than, say, reducing hardware costs by retiring a system.

Another cost-related challenge is the risk of project failure or overruns. Integrating AI into a complex legacy environment is pioneering work for many organizations, which means there’s a learning curve and potential for unforeseen complications. If a project stalls due to technical hurdles or internal resistance, sunk costs can accumulate quickly. CTOs must therefore build strong business cases and manage expectations from the outset. It’s wise to start with small pilot projects that demonstrate value in a focused area (for example, adding an AI chatbot to an existing customer service system, or using machine learning on a slice of legacy data for predictive maintenance). These pilots, if successful, can provide proof-of-concept and ROI evidence to justify scaling up. They also illuminate hidden challenges early, before a company has invested too heavily. Prioritization is key: not every legacy process should be “AI-ified” immediately. Leaders should identify high-impact use cases where AI can move the needle on key metrics (such as reducing processing time by 50%, or cutting error rates, etc.), and align integration efforts with strategic business goals. This ensures that money and effort target areas with the greatest payoff. It’s also prudent to factor in the ongoing costs, AI systems might require continuous cloud computing resources, model maintenance, and monitoring for bias or drift over time. By accounting for these, organizations can avoid budget surprises down the road. In summary, demonstrating clear ROI is both a challenge and a necessity in AI-legacy integration. Business owners and enterprise leaders will be most supportive when they see AI projects tied to concrete outcomes like cost savings, revenue growth, efficiency gains, or risk reduction. The role of the CTO (in partnership with other C-suite members) is to translate the technical potential of AI into business value terms, charting a phased investment plan that delivers tangible results and avoids the trap of innovation for innovation’s sake.

Final Thoughts: Navigating the AI-Legacy Landscape

Integrating AI with legacy systems is a journey that requires careful navigation. As we’ve explored, CTOs face a multifaceted challenge, they must modernize and innovate on top of aging foundations, all while keeping the enterprise secure, compliant, and running smoothly. From breaking down data silos and updating infrastructure to addressing security vulnerabilities and cultivating the right talent and culture, the hurdles are significant. Yet, these challenges are not insurmountable. With a strategic approach, organizations can turn their legacy liabilities into launchpads for AI-powered transformation. It begins with acknowledging the value locked inside legacy systems, the rich data and proven processes, and then methodically opening these up to new capabilities. Strong leadership and cross-functional collaboration are essential: CIOs and CTOs provide the technical vision, CISOs ensure risks are managed, HR heads develop the workforce’s skills, and business owners align AI efforts with overarching goals. When this coalition works in concert, legacy systems and AI can coexist and even synergize, delivering improvements that neither could achieve alone. For example, legacy transaction data can feed AI models to uncover patterns that drive smarter decisions, or AI interfaces can breathe new life into an old system by making it more user-friendly and automated.

In the end, integrating AI is a key part of the broader digital transformation that enterprises across industries are undertaking. Those that succeed in bridging the old and the new will reap substantial rewards, greater efficiency, better insights, enhanced customer experiences, and agility in the face of change. Those that fall behind may find their reliable but inflexible legacy systems turning into bottlenecks that competitors without such constraints will exploit. For CTOs and other leaders at this crossroads, the charge is clear: embrace AI integration as a strategic imperative, invest in overcoming the challenges, and guide your organization through the evolution. By doing so with foresight and care, you ensure that your company can leverage the power of AI today, without being held back by the technology of yesterday.

FAQ

Why is integrating AI with legacy systems challenging for enterprises?

Integrating AI with legacy systems is challenging because older systems often have data silos, outdated formats, limited processing capacity, and lack APIs for modern tools. These issues make it harder to connect AI solutions without disrupting business continuity.

How do data silos affect AI performance?

Data silos prevent AI models from accessing unified, high-quality datasets. Inconsistent or fragmented data leads to inaccurate predictions and limits the value AI can deliver. Breaking down silos through data integration and governance is essential for success.

What security risks come with AI integration in legacy systems?

Legacy systems often lack modern security controls and may no longer receive updates, making them vulnerable to cyberattacks. Adding AI connections can expose new vulnerabilities if not properly secured with measures like encryption, identity management, and API security.

How can companies overcome the AI talent gap?

Organizations can address the talent shortage by upskilling existing employees, hiring AI specialists, creating cross-functional teams, and fostering a culture that embraces AI. Training programs and internal AI champions can help ease the transition.

How should CTOs approach measuring ROI for AI in legacy environments?

CTOs should start with small pilot projects that demonstrate clear business value, such as improved efficiency or cost savings. These pilots can provide measurable outcomes, helping build a strong case for scaling AI integration across the organization.

References

  1. Saunders M. Crossing the AI chasm, how CTOs can drive meaningful adoption in legacy landscapes. Adaptavist; https://www.adaptavist.com/blog/crossing-the-ai-chasm--how-ctos-can-drive-adoption
  2. Integrass. Integrating AI into Legacy Apps: Key Challenges & Solutions. https://integrass.com/media/integrating-ai-into-legacy-apps-key-challenges-solutions-2025/
  3. Bawcom A, Fitzpatrick M, Cheung CW, Collins D, Gabrielli D. AI for IT modernization: Faster, cheaper, better. McKinsey & Company; https://www.mckinsey.com/capabilities/quantumblack/our-insights/ai-for-it-modernization-faster-cheaper-and-better
  4. Atera Team. Unveiling the hidden costs of legacy IT. Atera (Blog); https://www.atera.com/blog/hidden-costs-of-legacy-it/
  5. Salazar C. AI Integration Challenges: Legacy Systems, Data Silos, and Cultural Shifts. UnboundB2B; https://www.unboundb2b.com/cmo-playbook/ai-integration-challenges-legacy-systems-data-silos-and-cultural-shifts/
  6. Torres R. AI skills shortage surpasses big data, cybersecurity. CIO Dive; https://www.ciodive.com/news/AI-skill-shortage-adoption-enterprise/750106/
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